Energy Transfer Dynamics in Biomaterial Systems

ISBN-13: 9783642023057 / Angielski / Twarda / 2009 / 476 str.

Irene Burghardt;V. May;David A. Micha

Opis

The role of quantum coherence in promoting the e ciency of the initial stages of photosynthesis is an open and intriguing question. Lee, Cheng, and Fleming, Science 316, 1462 (2007) The understanding and design of functional biomaterials is one of today's grand challenge areas that has sparked an intense exchange between biology, materials sciences, electronics, and various other disciplines. Many new - velopments are underway in organic photovoltaics, molecular electronics, and biomimetic research involving, e. g., arti cal light-harvesting systems inspired by photosynthesis, along with a host of other concepts and device applications. In fact, materials scientists may well be advised to take advantage of Nature's 3. 8 billion year head-start in designing new materials for light-harvesting and electro-optical applications. Since many of these developments reach into the molecular domain, the - derstanding of nano-structured functional materials equally necessitates f- damental aspects of molecular physics, chemistry, and biology. The elementary energy and charge transfer processes bear much similarity to the molecular phenomena that have been revealed in unprecedented detail by ultrafast op- cal spectroscopies. Indeed, these spectroscopies, which were initially developed and applied for the study of small molecular species, have already evolved into an invaluable tool to monitor ultrafast dynamics in complex biological and materials systems. The molecular-level phenomena in question are often of intrinsically quantum mechanical character, and involve tunneling, non-Born- Oppenheimer e ects, and quantum-mechanical phase coherence.

Spis treści

Part I: Excitation Energy Transfer in Complex Molecular and Biological Systems.- Elisabetta Collini, Carles Curutchet, Tihana Mirkovic, Gregory D.Scholes: Electronic Energy Transfer in Photosynthetic Antenna Systems.- Hui Zhu, Volkhard May: Mixed Quantum Classical Simulations of Electronic Excitation Energy Transfer and Related Optical Spectra: Supramolecular Pheophorbide–a Complexes in Solution.- Eitan Geva, Jianyuan Shang: Conformational Structure and Dynamics from Single-Molecule FRET.- Part II: The Many Facets of DNA.- Eric R. Bittner, Arkadiusz Czader: Quantum Mechanics in Biology: Photoexcitations in DNA.- Dimitra Markovitsi, Thomas Gustavsson: Energy Flow in DNA Duplexes.- O. Kühn, N. Doslic, G. M. Krishnan, H. Fidder, K. Heyne Anharmonic: Vibrational Dynamics of DNA Oligomers.- Arnab Mukherjee, Richard Lavery, Biman Bagchi, James T. Hynes: Simulation Study of the Molecular Mechanism of Intercalation of the Anti-Cancer Drug Daunomycin into DNA.- Part III: Quantum Dynamics and Transport at Interfaces and Junctions.- Irene Burghardt, Eric R. Bittner, Hiroyuki Tamura, Andrey Pereverzev, John Glenn S. Ramon: Ultrafast Photophysics of Organic Semiconductor Junctions.- D. A. Ryndyk, R. Gutierrez, B. Song, G. Cuniberti: Green Function Techniques in the Treatment of Quantum Transport at the Molecular Scale.- Part IV: New Methods for Open Systems Dynamics.- Ulrich Kleinekathöfer: Time-Local Quantum Master Equations and their Applications to Dissipative Dynamics and Molecular Wires.- David A. Micha, Andrew S. Leathers: Reduced Density Matrix Equations for Combined Instantaneous and Delayed Dissipation in Many-Atom Systems, and their Numerical Treatment.- Part V: New Methods for Mixing Quantum and Classical Mechanics.- Robbie Grunwald, Aaron Kelly, Raymond Kapral: Quantum Dynamics in Almost Classical Environments.- S. Bonella, D. F. Coker, D. Mac Kernan, R. Kapral, G. Ciccotti: Trajectory Based Simulations of Quantum-Classical Systems.- Giovanni Ciccotti,Sergio Caprara, Federica Agostini: Do We Have a Consistent Non-Adiabatic Quantum-Classical Statistical Mechanics?.-