The ATLAS detector at the CERN Large Hadron Collider is an apparatus of unprecedented complexity, designed to probe physics in proton-proton collisions at centre-of-mass energies up to 14 TeV. It was installed in its underground cavern at the LHC during the period 2004 to 2008. Testing of individual subsystems began immediately with calibration systems and cosmic rays, and by 2008 full detector systems could be operated with the planned infrastructure, readout, and monitoring systems. Several commissioning runs of the full detector were organized in 2008 and 2009. During these runs the...