1. Host-pathogen interactions: a general introduction 2. Host Pathogen Interactions: Databases and Approaches for Data Generation 3. Generation of Host-Pathogen Interaction Data: An Overview of Recent Technological Advancements 4. Molecular Omics: A Promising Systems Biology Approach to Unravel Host-Pathogen Interactions 5. Computational methods for detection of host-pathogen interactions 6. Biological interaction networks and their application for microbial pathogenesis 7. Dual transcriptomics data and host-pathogen interaction detection 8. Functional overrepresentation analysis and its applications in microbial pathogenesis 9. Advancements in systems biology based analysis of microbial pathogenesis 10. Host-Pathogen interactions with special reference to microbiota analysis and integration of systems biology approaches 11. Role of Non-Coding RNAs in Host-Pathogen Interactions: A Systems Biology Approach 12. Systems Biology in Food Industry: Applications in Food Production, Engineering and Pathogen Detection